PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00023.1.g05810.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 413aa    MW: 44752.1 Da    PI: 6.5092
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00023.1.g05810.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like346.3e-11266291126
                         G2-like   1 kprlrWtpeLHerFveaveqLGGsek 26 
                                     k+r+rWt++LHe Fv++v++LGG+++
  Zjn_sc00023.1.g05810.1.sm.mkhc 266 KTRIRWTQDLHELFVDCVNKLGGADR 291
                                     68*********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.2E-8265295IPR009057Homeodomain-like
PfamPF143795.2E-20312357IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MQSERENCQE VSVLPAAYSQ VFRDPVITAM NTKKIKLHDH HSYGSQMCDP HLFQATAAGF  60
NFHQGFVSSG HSVPQQNGGG GGNWPQEEYI SQTPRSALAT QGVCVGSDPA SFFAAENLIG  120
MARFDCALPP MAGLRTAPFG RAPEADQLHR SVDPPLLRDD SVRTYYVPPQ QRDAATAHPA  180
LELPLQQQGL FGHASAARLL GGEPQNHPFS PHVAASTLLP AMAGPSVTSP MDRENALSRS  240
CSTGAPTTRT GNMVTATTPG QGAPSKTRIR WTQDLHELFV DCVNKLGGAD RKHEKRAAGN  300
DVLNLDPNTG EQITQALRVQ LDVQRRLHEQ LEIQRNLQLK IEEQGKKLQK MFEEQLKASK  360
SVLEPPRENR QDAGAASAVL GEDDDAFDDV QLLSVASSGF NDAGFPSKIK LPS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004960202.11e-164PREDICTED: uncharacterized protein LOC101784276
RefseqXP_004960203.11e-164PREDICTED: uncharacterized protein LOC101784276
RefseqXP_004960204.11e-164PREDICTED: uncharacterized protein LOC101784276
TrEMBLK3Z6D01e-164K3Z6D0_SETIT; Uncharacterized protein
STRINGSi022099m1e-163(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69333751
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-33G2-like family protein